3D structure

PDB id
7Z3N (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GUCCC*GGC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3N_107 not in the Motif Atlas
Geometric match to IL_5J7L_009
Geometric discrepancy: 0.3751
The information below is about IL_5J7L_009
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
Isolated non-canonical cWW pair
Motif group
IL_57744.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
22

Unit IDs

7Z3N|1|1|G|2729
7Z3N|1|1|U|2730
7Z3N|1|1|C|2731
7Z3N|1|1|C|2732
7Z3N|1|1|C|2733
*
7Z3N|1|1|G|2745
7Z3N|1|1|G|2746
7Z3N|1|1|C|2747

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LL
60S ribosomal protein L13
Chain LQ
Ribosomal protein L18-like protein
Chain La
60S ribosomal protein L28-like protein
Chain Lo
60S ribosomal protein L44-like protein

Coloring options:


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