IL_7Z3N_126

3D structure

PDB id

7Z3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CACG*CGCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3N_126 not in the Motif Atlas

Geometric match to IL_1D4R_001

Geometric discrepancy: 0.1914

The information below is about IL_1D4R_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

7Z3N|1|1|C|3118
7Z3N|1|1|A|3119
7Z3N|1|1|C|3120
7Z3N|1|1|G|3121
*
7Z3N|1|1|C|3224
7Z3N|1|1|G|3225
7Z3N|1|1|C|3226
7Z3N|1|1|G|3227

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LP

60S ribosomal protein l17-like protein

Chain Lf

60S ribosomal protein l33-like protein