IL_7Z3N_269

3D structure

PDB id

7Z3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGA*UUUU

Length

7 nucleotides

Bulged bases

7Z3N|1|2|U|957

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3N_269 not in the Motif Atlas

Homologous match to IL_8P9A_418

Geometric discrepancy: 0.4334

The information below is about IL_8P9A_418

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

7Z3N|1|2|G|865
7Z3N|1|2|G|866
7Z3N|1|2|A|867
*
7Z3N|1|2|U|956
7Z3N|1|2|U|957
7Z3N|1|2|U|958
7Z3N|1|2|U|959

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SN

40S ribosomal protein S13-like protein

Chain Sb

Ribosomal protein s27-like protein