IL_7Z3O_006

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AG*CGUUGU

Length

8 nucleotides

Bulged bases

7Z3O|1|1|U|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_006 not in the Motif Atlas

Geometric match to IL_5TBW_007

Geometric discrepancy: 0.1644

The information below is about IL_5TBW_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19724.3

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

7Z3O|1|1|A|124
7Z3O|1|1|G|125
*
7Z3O|1|1|C|140
7Z3O|1|1|G|141
7Z3O|1|1|U|142
7Z3O|1|1|U|143
7Z3O|1|1|G|144
7Z3O|1|1|U|145

Current chains

Chain 1

26S rRNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L8

Chain LN

Ribosomal protein L15