IL_7Z3O_058

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACUG*CUC

Length

8 nucleotides

Bulged bases

7Z3O|1|1|A|1246

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_058 not in the Motif Atlas

Geometric match to IL_4V88_426

Geometric discrepancy: 0.1947

The information below is about IL_4V88_426

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7Z3O|1|1|G|1245
7Z3O|1|1|A|1246
7Z3O|1|1|C|1247
7Z3O|1|1|U|1248
7Z3O|1|1|G|1249
*
7Z3O|1|1|C|1258
7Z3O|1|1|U|1259
7Z3O|1|1|C|1260

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LK

60S ribosomal protein L12-like protein

Chain Ls

60S acidic ribosomal protein P0