IL_7Z3O_135

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AA*UCCU

Length

6 nucleotides

Bulged bases

7Z3O|1|1|C|3323, 7Z3O|1|1|C|3324

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_135 not in the Motif Atlas

Homologous match to IL_8C3A_137

Geometric discrepancy: 0.3744

The information below is about IL_8C3A_137

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7Z3O|1|1|A|3265
7Z3O|1|1|A|3266
*
7Z3O|1|1|U|3322
7Z3O|1|1|C|3323
7Z3O|1|1|C|3324
7Z3O|1|1|U|3325

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3-like protein

Chain Ld

Putative 60S ribosomal protein