IL_7Z3O_149

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUCGU*AAU

Length

8 nucleotides

Bulged bases

7Z3O|1|2|C|113, 7Z3O|1|2|G|114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_149 not in the Motif Atlas

Geometric match to IL_4V9F_097

Geometric discrepancy: 0.2251

The information below is about IL_4V9F_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

7Z3O|1|2|A|111
7Z3O|1|2|U|112
7Z3O|1|2|C|113
7Z3O|1|2|G|114
7Z3O|1|2|U|115
*
7Z3O|1|2|A|297
7Z3O|1|2|A|298
7Z3O|1|2|U|299

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11-like protein