IL_7Z3O_152

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCGU*AGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_152 not in the Motif Atlas

Geometric match to IL_6CZR_168

Geometric discrepancy: 0.2337

The information below is about IL_6CZR_168

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67743.1

Basepair signature

cWW-cWW-cWH-cWW

Number of instances in this motif group

9

Unit IDs

7Z3O|1|2|C|146
7Z3O|1|2|C|147
7Z3O|1|2|G|148
7Z3O|1|2|U|149
*
7Z3O|1|2|A|159
7Z3O|1|2|G|160
7Z3O|1|2|A|161
7Z3O|1|2|G|162

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LW

eL24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24