3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
UUUCGA*UG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3O_160 not in the Motif Atlas
Homologous match to IL_4V88_403
Geometric discrepancy: 0.3912
The information below is about IL_4V88_403
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_85724.1
Basepair signature
cWW-L-cWW-L-L-R
Number of instances in this motif group
2

Unit IDs

7Z3O|1|2|U|315
7Z3O|1|2|U|316
7Z3O|1|2|U|317
7Z3O|1|2|C|318
7Z3O|1|2|G|319
7Z3O|1|2|A|320
*
7Z3O|1|2|U|342
7Z3O|1|2|G|343

Current chains

Chain 2
18S rRNA

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA
Chain LR
Ribosomal protein L19
Chain SI
40S ribosomal protein S8
Chain SL
40S ribosomal protein S11-like protein

Coloring options:


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