IL_7Z3O_166

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUA*UAAU

Length

7 nucleotides

Bulged bases

7Z3O|1|2|A|502

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_166 not in the Motif Atlas

Geometric match to IL_3GM7_004

Geometric discrepancy: 0.1978

The information below is about IL_3GM7_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

7Z3O|1|2|A|478
7Z3O|1|2|U|479
7Z3O|1|2|A|480
*
7Z3O|1|2|U|501
7Z3O|1|2|A|502
7Z3O|1|2|A|503
7Z3O|1|2|U|504

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein s9-like protein

Chain Se

40S ribosomal protein S30