IL_7Z3O_171

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

7Z3O|1|2|U|555

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_171 not in the Motif Atlas

Geometric match to IL_4V88_414

Geometric discrepancy: 0.3115

The information below is about IL_4V88_414

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7Z3O|1|2|G|554
7Z3O|1|2|U|555
7Z3O|1|2|C|556
*
7Z3O|1|2|G|583
7Z3O|1|2|C|584

Current chains

Chain 2

18S rRNA

Nearby chains

Chain B

HABP4_PAI-RBP1 domain-containing protein

Chain SD

40S ribosomal protein S3-like protein

Chain Se

40S ribosomal protein S30