IL_7Z3O_188

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUGUCAG*CUUGGAUUUA

Length

17 nucleotides

Bulged bases

7Z3O|1|2|G|911

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_188 not in the Motif Atlas

Homologous match to IL_8C3A_440

Geometric discrepancy: 0.1356

The information below is about IL_8C3A_440

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_22252.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7Z3O|1|2|U|891
7Z3O|1|2|U|892
7Z3O|1|2|G|893
7Z3O|1|2|U|894
7Z3O|1|2|C|895
7Z3O|1|2|A|896
7Z3O|1|2|G|897
*
7Z3O|1|2|C|908
7Z3O|1|2|U|909
7Z3O|1|2|U|910
7Z3O|1|2|G|911
7Z3O|1|2|G|912
7Z3O|1|2|A|913
7Z3O|1|2|U|914
7Z3O|1|2|U|915
7Z3O|1|2|U|916
7Z3O|1|2|A|917

Current chains

Chain 2

18S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain SB

40S ribosomal protein S1

Chain SO

40S ribosomal protein S14-like protein