3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CGA*UGUUUGG
Length
10 nucleotides
Bulged bases
7Z3O|1|2|U|1095, 7Z3O|1|2|G|1097
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3O_191 not in the Motif Atlas
Homologous match to IL_8P9A_425
Geometric discrepancy: 0.1668
The information below is about IL_8P9A_425
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_82706.2
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
3

Unit IDs

7Z3O|1|2|C|1032
7Z3O|1|2|G|1033
7Z3O|1|2|A|1034
*
7Z3O|1|2|U|1092
7Z3O|1|2|G|1093
7Z3O|1|2|U|1094
7Z3O|1|2|U|1095
7Z3O|1|2|U|1096
7Z3O|1|2|G|1097
7Z3O|1|2|G|1098

Current chains

Chain 2
18S rRNA

Nearby chains

Chain SC
40S ribosomal protein S2-like protein
Chain SL
40S ribosomal protein S11-like protein
Chain SN
40S ribosomal protein S13-like protein
Chain SW
40S ribosomal protein S22-like protein
Chain SX
40S ribosomal protein s23-like protein

Coloring options:


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