IL_7Z3O_208

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_208 not in the Motif Atlas

Homologous match to IL_4V88_454

Geometric discrepancy: 0.1633

The information below is about IL_4V88_454

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

7Z3O|1|2|C|1303
7Z3O|1|2|U|1304
7Z3O|1|2|G|1305
*
7Z3O|1|2|C|1314
7Z3O|1|2|G|1315

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SR

40S ribosomal protein S17-like protein

Chain Sa

40S ribosomal protein S26