IL_7Z3O_215

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGGAUA*UUCAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_215 not in the Motif Atlas

Homologous match to IL_4V88_462

Geometric discrepancy: 0.1499

The information below is about IL_4V88_462

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82488.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7Z3O|1|2|G|1536
7Z3O|1|2|G|1537
7Z3O|1|2|G|1538
7Z3O|1|2|A|1539
7Z3O|1|2|U|1540
7Z3O|1|2|A|1541
*
7Z3O|1|2|U|1562
7Z3O|1|2|U|1563
7Z3O|1|2|C|1564
7Z3O|1|2|A|1565
7Z3O|1|2|A|1566
7Z3O|1|2|C|1567

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SS

Putative ribosomal protein

Chain ST

40S ribosomal protein S19-like protein