IL_7Z3O_253

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAUU*AAC

Length

7 nucleotides

Bulged bases

7Z3O|1|1|A|2674

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_253 not in the Motif Atlas

Geometric match to IL_4V88_455

Geometric discrepancy: 0.2199

The information below is about IL_4V88_455

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7Z3O|1|1|G|2673
7Z3O|1|1|A|2674
7Z3O|1|1|U|2675
7Z3O|1|1|U|2676
*
7Z3O|1|1|A|2698
7Z3O|1|1|A|2699
7Z3O|1|1|C|2700

Current chains

Chain 1

26S rRNA

Nearby chains

Chain Lb

60S ribosomal protein L29

Chain Lo

60S ribosomal protein L44-like protein