IL_7ZFW_016

3D structure

PDB id

7ZFW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 80S ribosome obtained from ssDNA coated grid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGUCGGCGGCCCGG*UCCCCCGACC

Length

25 nucleotides

Bulged bases

7ZFW|1|L5|C|501, 7ZFW|1|L5|C|502, 7ZFW|1|L5|C|503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZFW|1|L5|G|491
7ZFW|1|L5|U|492
7ZFW|1|L5|G|493
7ZFW|1|L5|U|494
7ZFW|1|L5|C|495
7ZFW|1|L5|G|496
7ZFW|1|L5|G|497
7ZFW|1|L5|C|498
7ZFW|1|L5|G|499
7ZFW|1|L5|G|500
7ZFW|1|L5|C|501
7ZFW|1|L5|C|502
7ZFW|1|L5|C|503
7ZFW|1|L5|G|504
7ZFW|1|L5|G|505
*
7ZFW|1|L5|U|653
7ZFW|1|L5|C|654
7ZFW|1|L5|C|655
7ZFW|1|L5|C|656
7ZFW|1|L5|C|657
7ZFW|1|L5|C|658
7ZFW|1|L5|G|659
7ZFW|1|L5|A|660
7ZFW|1|L5|C|661
7ZFW|1|L5|C|662

Current chains

Chain L5

RNA (615-MER)

Nearby chains