IL_7ZJW_015

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CACUCC*GCCCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|C|168
7ZJW|1|L5|A|169
7ZJW|1|L5|C|170
7ZJW|1|L5|U|171
7ZJW|1|L5|C|172
7ZJW|1|L5|C|173
*
7ZJW|1|L5|G|263
7ZJW|1|L5|C|264
7ZJW|1|L5|C|265
7ZJW|1|L5|C|266
7ZJW|1|L5|G|267

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LO

60S ribosomal protein eL13

Chain Lk

60S ribosomal protein uL29