IL_7ZJW_042

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

7ZJW|1|L5|A|831, 7ZJW|1|L5|A|834, 7ZJW|1|L5|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|A|726
7ZJW|1|L5|A|727
7ZJW|1|L5|G|728
7ZJW|1|L5|G|729
*
7ZJW|1|L5|C|827
7ZJW|1|L5|A|828
7ZJW|1|L5|G|829
7ZJW|1|L5|C|830
7ZJW|1|L5|A|831
7ZJW|1|L5|G|832
7ZJW|1|L5|C|833
7ZJW|1|L5|A|834
7ZJW|1|L5|G|835
7ZJW|1|L5|C|836
7ZJW|1|L5|U|837

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LF

60S ribosomal protein L4

Chain LP

60S ribosomal protein L14

Chain LV

60S ribosomal protein eL20