IL_7ZJW_045

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACGCCUCGC*GCGGGCGCGACCCC

Length

24 nucleotides

Bulged bases

7ZJW|1|L5|C|791, 7ZJW|1|L5|C|796, 7ZJW|1|L5|C|797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|G|756
7ZJW|1|L5|A|757
7ZJW|1|L5|C|758
7ZJW|1|L5|G|759
7ZJW|1|L5|C|760
7ZJW|1|L5|C|761
7ZJW|1|L5|U|762
7ZJW|1|L5|C|763
7ZJW|1|L5|G|764
7ZJW|1|L5|C|765
*
7ZJW|1|L5|G|786
7ZJW|1|L5|C|787
7ZJW|1|L5|G|788
7ZJW|1|L5|G|789
7ZJW|1|L5|G|790
7ZJW|1|L5|C|791
7ZJW|1|L5|G|792
7ZJW|1|L5|C|793
7ZJW|1|L5|G|794
7ZJW|1|L5|A|795
7ZJW|1|L5|C|796
7ZJW|1|L5|C|797
7ZJW|1|L5|C|798
7ZJW|1|L5|C|799

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LK

60S ribosomal protein L9