IL_7ZJW_048
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUC*GCUCG
- Length
- 8 nucleotides
- Bulged bases
- 7ZJW|1|L5|C|1105, 7ZJW|1|L5|U|1106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_048 not in the Motif Atlas
- Geometric match to IL_4TS2_003
- Geometric discrepancy: 0.2637
- The information below is about IL_4TS2_003
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
7ZJW|1|L5|C|997
7ZJW|1|L5|U|998
7ZJW|1|L5|C|999
*
7ZJW|1|L5|G|1104
7ZJW|1|L5|C|1105
7ZJW|1|L5|U|1106
7ZJW|1|L5|C|1107
7ZJW|1|L5|G|1108
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LI
- 60S ribosomal Protein uL30
- Chain Le
- 60S ribosomal protein L29
Coloring options: