IL_7ZJW_072

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUCGCAACCCCG*CG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|C|1649
7ZJW|1|L5|U|1650
7ZJW|1|L5|C|1651
7ZJW|1|L5|G|1652
7ZJW|1|L5|C|1653
7ZJW|1|L5|A|1654
7ZJW|1|L5|A|1655
7ZJW|1|L5|C|1656
7ZJW|1|L5|C|1657
7ZJW|1|L5|C|1658
7ZJW|1|L5|C|1659
7ZJW|1|L5|G|1660
*
7ZJW|1|L5|C|1780
7ZJW|1|L5|G|1781

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LF

60S ribosomal protein L4

Chain LI

60S ribosomal Protein uL30

Chain LT

60S ribosomal Protein eL18

Chain LW

60S ribosomal protein eL21

Chain Le

60S ribosomal protein L29