IL_7ZJW_076

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUAGAG*C(PSU)A(PSU)(PSU)CU

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|A|1685
7ZJW|1|L5|U|1686
7ZJW|1|L5|U|1687
7ZJW|1|L5|A|1688
7ZJW|1|L5|G|1689
7ZJW|1|L5|A|1690
7ZJW|1|L5|G|1691
*
7ZJW|1|L5|C|1717
7ZJW|1|L5|PSU|1718
7ZJW|1|L5|A|1719
7ZJW|1|L5|PSU|1720
7ZJW|1|L5|PSU|1721
7ZJW|1|L5|C|1722
7ZJW|1|L5|U|1723

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LG

Ribosomal_L18_c domain-containing protein

Chain LL

60S ribosomal protein L10