IL_7ZJW_140

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGUGUAGAAUAAG*CUAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|G|3687
7ZJW|1|L5|G|3688
7ZJW|1|L5|U|3689
7ZJW|1|L5|G|3690
7ZJW|1|L5|U|3691
7ZJW|1|L5|A|3692
7ZJW|1|L5|G|3693
7ZJW|1|L5|A|3694
7ZJW|1|L5|A|3695
7ZJW|1|L5|U|3696
7ZJW|1|L5|A|3697
7ZJW|1|L5|A|3698
7ZJW|1|L5|G|3699
*
7ZJW|1|L5|C|3782
7ZJW|1|L5|U|3783
7ZJW|1|L5|A|3784
7ZJW|1|L5|C|3785

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Ll

60S ribosomal protein L36

Chain Lx

60S ribosomal protein uL1