IL_7ZJW_170

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

A(OMG)ACAU(PSU)U*ACCA(PSU)CU

Length

15 nucleotides

Bulged bases

7ZJW|1|L5|C|4416

QA status

Modified nucleotides: OMG, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|A|4368
7ZJW|1|L5|OMG|4369
7ZJW|1|L5|A|4370
7ZJW|1|L5|C|4371
7ZJW|1|L5|A|4372
7ZJW|1|L5|U|4373
7ZJW|1|L5|PSU|4374
7ZJW|1|L5|U|4375
*
7ZJW|1|L5|A|4415
7ZJW|1|L5|C|4416
7ZJW|1|L5|C|4417
7ZJW|1|L5|A|4418
7ZJW|1|L5|PSU|4419
7ZJW|1|L5|C|4420
7ZJW|1|L5|U|4421

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L3

Chain LY

60S ribosomal protein L23

Chain LZ

60S ribosomal protein eL24