IL_7ZJW_187

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

7ZJW|1|L5|G|4780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|U|4742
7ZJW|1|L5|C|4743
7ZJW|1|L5|G|4744
7ZJW|1|L5|U|4745
7ZJW|1|L5|A|4746
7ZJW|1|L5|C|4747
7ZJW|1|L5|G|4748
*
7ZJW|1|L5|U|4778
7ZJW|1|L5|U|4779
7ZJW|1|L5|G|4780
7ZJW|1|L5|A|4781
7ZJW|1|L5|A|4782
7ZJW|1|L5|A|4783

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L3

Chain LZ

60S ribosomal protein eL24

Chain Lg

60S ribosomal protein eL31