3D structure

PDB id
7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 80S ribosome as it decodes the Sec-UGA codon
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
AGCAU*A(PSU)A(PSU)U
Length
10 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZJW|1|S2|A|22
7ZJW|1|S2|G|23
7ZJW|1|S2|C|24
7ZJW|1|S2|A|25
7ZJW|1|S2|U|26
*
7ZJW|1|S2|A|649
7ZJW|1|S2|PSU|650
7ZJW|1|S2|A|651
7ZJW|1|S2|PSU|652
7ZJW|1|S2|U|653

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SU
40S ribosomal protein S9
Chain Si
40S ribosomal protein S23

Coloring options:

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