IL_7ZJW_214

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

7ZJW|1|S2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|G|130
7ZJW|1|S2|U|140
7ZJW|1|S2|A|141
7ZJW|1|S2|C|142
7ZJW|1|S2|U|143
7ZJW|1|S2|U|144
*
7ZJW|1|S2|A|175
7ZJW|1|S2|U|176
7ZJW|1|S2|G|177
7ZJW|1|S2|C|178
7ZJW|1|S2|C|179
7ZJW|1|S2|G|180
7ZJW|1|S2|A|181
7ZJW|1|S2|C|182

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SR

40S ribosomal protein S6