IL_7ZJW_217

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CA(PSU)U*ACCUCGGG

Length

12 nucleotides

Bulged bases

7ZJW|1|S2|U|306, 7ZJW|1|S2|G|308

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|C|216
7ZJW|1|S2|A|217
7ZJW|1|S2|PSU|218
7ZJW|1|S2|U|219
*
7ZJW|1|S2|A|303
7ZJW|1|S2|C|304
7ZJW|1|S2|C|305
7ZJW|1|S2|U|306
7ZJW|1|S2|C|307
7ZJW|1|S2|G|308
7ZJW|1|S2|G|309
7ZJW|1|S2|G|310

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SP

40S ribosomal protein eS4

Chain ST

40S ribosomal protein S8