IL_7ZJW_225
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AU*AAU
- Length
- 5 nucleotides
- Bulged bases
- 7ZJW|1|S2|A|556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_225 not in the Motif Atlas
- Geometric match to IL_6WPI_001
- Geometric discrepancy: 0.276
- The information below is about IL_6WPI_001
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
7ZJW|1|S2|A|530
7ZJW|1|S2|U|531
*
7ZJW|1|S2|A|555
7ZJW|1|S2|A|556
7ZJW|1|S2|U|557
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S30
- Chain SU
- 40S ribosomal protein S9
Coloring options: