IL_7ZJW_268

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGACAGGA*UUCC

Length

12 nucleotides

Bulged bases

7ZJW|1|S2|G|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|G|1281
7ZJW|1|S2|G|1282
7ZJW|1|S2|A|1283
7ZJW|1|S2|C|1284
7ZJW|1|S2|A|1285
7ZJW|1|S2|G|1286
7ZJW|1|S2|G|1287
7ZJW|1|S2|A|1288
*
7ZJW|1|S2|U|1315
7ZJW|1|S2|U|1316
7ZJW|1|S2|C|1317
7ZJW|1|S2|C|1318

Current chains

Chain S2

18S rRNA

Nearby chains

Chain B

SECIS Binding Protein 2

Chain SD

40S ribosomal protein S27a

Chain SV

40S ribosomal protein eS10

Chain SX

40S ribosomal protein S12