IL_7ZJW_304

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCCGGC*GCCCCG

Length

12 nucleotides

Bulged bases

7ZJW|1|L5|C|732, 7ZJW|1|L5|C|733, 7ZJW|1|L5|C|823, 7ZJW|1|L5|C|824

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|C|731
7ZJW|1|L5|C|732
7ZJW|1|L5|C|733
7ZJW|1|L5|G|734
7ZJW|1|L5|G|735
7ZJW|1|L5|C|736
*
7ZJW|1|L5|G|820
7ZJW|1|L5|C|821
7ZJW|1|L5|C|822
7ZJW|1|L5|C|823
7ZJW|1|L5|C|824
7ZJW|1|L5|G|825

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LP

60S ribosomal protein L14