IL_7ZJW_317

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUAGU(A2M)(OMG)(OMC)*GCGAAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M, OMG, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|G|2201
7ZJW|1|L5|U|2202
7ZJW|1|L5|A|2203
7ZJW|1|L5|G|2204
7ZJW|1|L5|U|2205
7ZJW|1|L5|A2M|2206
7ZJW|1|L5|OMG|2207
7ZJW|1|L5|OMC|2208
*
7ZJW|1|L5|G|3589
7ZJW|1|L5|C|3590
7ZJW|1|L5|G|3591
7ZJW|1|L5|A|3592
7ZJW|1|L5|A|3593
7ZJW|1|L5|A|3594
7ZJW|1|L5|C|3595

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LF

60S ribosomal protein L4

Chain LS

60S ribosomal protein uL22