IL_7ZJW_325

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAA(OMG)AGACA*UCGUUUUUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|G|3673
7ZJW|1|L5|A|3674
7ZJW|1|L5|A|3675
7ZJW|1|L5|OMG|3676
7ZJW|1|L5|A|3677
7ZJW|1|L5|G|3678
7ZJW|1|L5|A|3679
7ZJW|1|L5|C|3680
7ZJW|1|L5|A|3681
*
7ZJW|1|L5|U|3791
7ZJW|1|L5|C|3792
7ZJW|1|L5|G|3793
7ZJW|1|L5|U|3794
7ZJW|1|L5|U|3795
7ZJW|1|L5|U|3796
7ZJW|1|L5|U|3797
7ZJW|1|L5|U|3798
7ZJW|1|L5|U|3799
7ZJW|1|L5|C|3800

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein eL8

Chain Ll

60S ribosomal protein L36

Chain SM

40S ribosomal protein S3a