IL_7ZJW_344

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUGACCC*GGGA(PSU)G

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|C|188
7ZJW|1|S2|U|189
7ZJW|1|S2|G|190
7ZJW|1|S2|A|191
7ZJW|1|S2|C|192
7ZJW|1|S2|C|193
7ZJW|1|S2|C|194
*
7ZJW|1|S2|G|206
7ZJW|1|S2|G|207
7ZJW|1|S2|G|208
7ZJW|1|S2|A|209
7ZJW|1|S2|PSU|210
7ZJW|1|S2|G|211

Current chains

Chain S2

18S rRNA

Nearby chains

Chain ST

40S ribosomal protein S8