IL_7ZJW_345
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAU*(A2M)AG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_345 not in the Motif Atlas
- Homologous match to IL_8C3A_414
- Geometric discrepancy: 0.177
- The information below is about IL_8C3A_414
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 18
Unit IDs
7ZJW|1|S2|C|460
7ZJW|1|S2|A|461
7ZJW|1|S2|U|462
*
7ZJW|1|S2|A2M|469
7ZJW|1|S2|A|470
7ZJW|1|S2|G|471
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain E
- eEFSec
- Chain LY
- 60S ribosomal protein L23
- Chain SR
- 40S ribosomal protein S6
Coloring options: