IL_7ZJW_367
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UC*GGA
- Length
- 5 nucleotides
- Bulged bases
- 7ZJW|1|S2|G|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_367 not in the Motif Atlas
- Homologous match to IL_8P9A_398
- Geometric discrepancy: 0.1045
- The information below is about IL_8P9A_398
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
7ZJW|1|S2|U|496
7ZJW|1|S2|C|497
*
7ZJW|1|S2|G|507
7ZJW|1|S2|G|508
7ZJW|1|S2|A|509
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SP
- 40S ribosomal protein eS4
- Chain SU
- 40S ribosomal protein S9
- Chain Sj
- 40S ribosomal protein S24
Coloring options: