IL_7ZJX_003
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 7ZJX|1|L8|C|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_003 not in the Motif Atlas
- Geometric match to IL_1DQF_001
- Geometric discrepancy: 0.2569
- The information below is about IL_1DQF_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
7ZJX|1|L5|C|6
7ZJX|1|L5|C|7
*
7ZJX|1|L8|G|149
7ZJX|1|L8|C|150
7ZJX|1|L8|G|151
Current chains
- Chain L5
- 28S rRNA
- Chain L8
- 5.8S rRNA
Nearby chains
- Chain LJ
- 60S ribosomal protein eL8
- Chain LQ
- Ribosomal protein L15
- Chain La
- Ribosomal_L23eN domain-containing protein
Coloring options: