IL_7ZJX_026

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

7ZJX|1|L5|U|467, 7ZJX|1|L5|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|A|466
7ZJX|1|L5|U|467
7ZJX|1|L5|U|468
7ZJX|1|L5|C|469
7ZJX|1|L5|A|470
7ZJX|1|L5|A|471
7ZJX|1|L5|C|472
*
7ZJX|1|L5|G|676
7ZJX|1|L5|C|677
7ZJX|1|L5|G|678
7ZJX|1|L5|C|679
7ZJX|1|L5|A|680
7ZJX|1|L5|U|681
7ZJX|1|L5|U|682
7ZJX|1|L5|U|683

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LH

60S ribosomal protein L6

Chain Ls

60S ribosomal protein eL28