IL_7ZJX_065

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAUUAGAG*C(PSU)A(PSU)(PSU)CUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|G|1684
7ZJX|1|L5|A|1685
7ZJX|1|L5|U|1686
7ZJX|1|L5|U|1687
7ZJX|1|L5|A|1688
7ZJX|1|L5|G|1689
7ZJX|1|L5|A|1690
7ZJX|1|L5|G|1691
*
7ZJX|1|L5|C|1717
7ZJX|1|L5|PSU|1718
7ZJX|1|L5|A|1719
7ZJX|1|L5|PSU|1720
7ZJX|1|L5|PSU|1721
7ZJX|1|L5|C|1722
7ZJX|1|L5|U|1723
7ZJX|1|L5|C|1724

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LG

Ribosomal_L18_c domain-containing protein

Chain LL

Ribosomal protein L10