3D structure

PDB id
8GLP (explore in PDB, NAKB, or RNA 3D Hub)
Description
mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)
Experimental method
ELECTRON MICROSCOPY
Resolution
1.67 Å

Loop

Sequence
GAUUAGAG*C(PSU)A(PSU)(PSU)CUC
Length
16 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8GLP|1|L5|G|1745
8GLP|1|L5|A|1746
8GLP|1|L5|U|1747
8GLP|1|L5|U|1748
8GLP|1|L5|A|1749
8GLP|1|L5|G|1750
8GLP|1|L5|A|1751
8GLP|1|L5|G|1752
*
8GLP|1|L5|C|1778
8GLP|1|L5|PSU|1779
8GLP|1|L5|A|1780
8GLP|1|L5|PSU|1781
8GLP|1|L5|PSU|1782
8GLP|1|L5|C|1783
8GLP|1|L5|U|1784
8GLP|1|L5|C|1785

Current chains

Chain L5
28S rRNA

Nearby chains

Chain L7
5S ribosomal RNA; 5S rRNA
Chain LD
60S ribosomal protein L5
Chain LI
60S ribosomal protein L10

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.6319 s