IL_7ZJX_100
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 7ZJX|1|L5|G|3571
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_100 not in the Motif Atlas
- Homologous match to IL_8C3A_083
- Geometric discrepancy: 0.0835
- The information below is about IL_8C3A_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06455.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
7ZJX|1|L5|A|2693
7ZJX|1|L5|G|2694
7ZJX|1|L5|U|2695
7ZJX|1|L5|C|2696
7ZJX|1|L5|G|2697
7ZJX|1|L5|G|2698
*
7ZJX|1|L5|C|3569
7ZJX|1|L5|U|3570
7ZJX|1|L5|G|3571
7ZJX|1|L5|U|3572
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein uL3
- Chain LY
- 60S ribosomal protein L23
Coloring options: