IL_7ZJX_111
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCU*G(OMG)U
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_111 not in the Motif Atlas
- Geometric match to IL_2ZNI_001
- Geometric discrepancy: 0.1194
- The information below is about IL_2ZNI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
7ZJX|1|L5|G|3437
7ZJX|1|L5|C|3438
7ZJX|1|L5|U|3439
*
7ZJX|1|L5|G|3475
7ZJX|1|L5|OMG|3476
7ZJX|1|L5|U|3477
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein uL2
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SM
- 40S ribosomal protein S3a
Coloring options: