IL_7ZJX_284

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

7ZJX|1|L5|G|119, 7ZJX|1|L5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|C|118
7ZJX|1|L5|G|119
7ZJX|1|L5|A|120
7ZJX|1|L5|A|121
7ZJX|1|L5|U|122
*
7ZJX|1|L5|A|147
7ZJX|1|L5|A|148
7ZJX|1|L5|A|149
7ZJX|1|L5|U|150
7ZJX|1|L5|G|151
7ZJX|1|L5|U|152
7ZJX|1|L5|G|153

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LJ

60S ribosomal protein eL8

Chain LQ

Ribosomal protein L15

Chain Lk

60S ribosomal protein L35