IL_7ZJX_350
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 7ZJX|1|L8|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_350 not in the Motif Atlas
- Homologous match to IL_8P9A_371
- Geometric discrepancy: 0.2011
- The information below is about IL_8P9A_371
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
7ZJX|1|L8|U|64
7ZJX|1|L8|A|65
7ZJX|1|L8|A|66
*
7ZJX|1|L8|U|92
7ZJX|1|L8|C|93
7ZJX|1|L8|G|94
7ZJX|1|L8|A|95
Current chains
- Chain L8
- 5.8S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lb
- Ribosomal protein L26
- Chain Lk
- 60S ribosomal protein L35
- Chain Lm
- Ribosomal protein L37
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