IL_7ZP8_023

3D structure

PDB id

7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZP8_023 not in the Motif Atlas

Geometric match to IL_4V9F_027

Geometric discrepancy: 0.1204

The information below is about IL_4V9F_027

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.1

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

22

Unit IDs

7ZP8|1|b|U|703
7ZP8|1|b|G|704
7ZP8|1|b|A|705
7ZP8|1|b|A|706
7ZP8|1|b|G|707
*
7ZP8|1|b|U|724
7ZP8|1|b|G|725
7ZP8|1|b|G|726
7ZP8|1|b|A|727
7ZP8|1|b|G|728

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2