IL_7ZP8_109
3D structure
- PDB id
- 7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 7ZP8|1|b|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZP8_109 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.0906
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
7ZP8|1|b|G|1666
7ZP8|1|b|G|1667
7ZP8|1|b|A|1668
7ZP8|1|b|A|1669
7ZP8|1|b|C|1670
7ZP8|1|b|U|1671
7ZP8|1|b|A|1672
7ZP8|1|b|G|1673
7ZP8|1|b|G|1674
*
7ZP8|1|b|C|1990
7ZP8|1|b|U|1991
7ZP8|1|b|G|1992
7ZP8|1|b|U|1993
7ZP8|1|b|C|1994
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L14
Coloring options: