IL_7ZPQ_042

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

ACGUUU*AUCGU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZPQ|1|2|A|817
7ZPQ|1|2|C|818
7ZPQ|1|2|G|819
7ZPQ|1|2|U|820
7ZPQ|1|2|U|821
7ZPQ|1|2|U|822
*
7ZPQ|1|2|A|850
7ZPQ|1|2|U|851
7ZPQ|1|2|C|852
7ZPQ|1|2|G|853
7ZPQ|1|2|U|854

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AH

40S ribosomal protein S7-A

Chain BQ

60S ribosomal protein L19-A