IL_7ZPQ_101
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- GAAAGCA*UUAAGC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZPQ_101 not in the Motif Atlas
- Homologous match to IL_5TBW_373
- Geometric discrepancy: 0.1
- The information below is about IL_5TBW_373
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- No text annotation
- Motif group
- IL_10207.3
- Basepair signature
- cWW-cWW-L-cSW-L-R-L-cWW-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ZPQ|1|4|G|21
7ZPQ|1|4|A|22
7ZPQ|1|4|A|23
7ZPQ|1|4|A|24
7ZPQ|1|4|G|25
7ZPQ|1|4|C|26
7ZPQ|1|4|A|27
*
7ZPQ|1|4|U|53
7ZPQ|1|4|U|54
7ZPQ|1|4|A|55
7ZPQ|1|4|A|56
7ZPQ|1|4|G|57
7ZPQ|1|4|C|58
Current chains
- Chain 4
- 5S ribosomal RNA
Nearby chains
- Chain BD
- RPL5 isoform 1
- Chain BJ
- RPL11B isoform 1
Coloring options: