3D structure

PDB id
7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.47 Å

Loop

Sequence
CGUAUC*GAAG
Length
10 nucleotides
Bulged bases
7ZPQ|1|5|U|981, 7ZPQ|1|5|A|1103
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZPQ|1|5|C|977
7ZPQ|1|5|G|978
7ZPQ|1|5|U|979
7ZPQ|1|5|A|980
7ZPQ|1|5|U|981
7ZPQ|1|5|C|982
*
7ZPQ|1|5|G|1101
7ZPQ|1|5|A|1102
7ZPQ|1|5|A|1103
7ZPQ|1|5|G|1104

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain BF
60S ribosomal protein L7-A
Chain BP
60S ribosomal protein L18-A
Chain Ba
60S ribosomal protein L29

Coloring options:

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